Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BK664_12835 | Not Available | Negative | 2803505 - 2804875 | 48045.3 |
| succinylglutamate desuccinylase | BK664_12840 | Not Available | Negative | 2804907 - 2805920 | 36404.7 |
| lysr family transcriptional regulator | BK664_12845 | Not Available | Negative | 2806003 - 2806929 | 34153.1 |
| lysr family transcriptional regulator | BK664_12850 | Not Available | Negative | 2807265 - 2808182 | 33471.7 |
| mfs transporter | BK664_12855 | Not Available | Negative | 2808283 - 2809482 | 41864.5 |
| (2fe-2s)-binding protein | BK664_12865 | Not Available | Positive | 2811057 - 2811530 | 16660.2 |
| aldehyde dehydrogenase | BK664_12870 | Not Available | Positive | 2811527 - 2813764 | 80919.0 |
| alkene reductase | BK664_12875 | Not Available | Positive | 2813915 - 2815027 | 40403.7 |
| arac family transcriptional regulator | BK664_12880 | Not Available | Negative | 2815372 - 2816304 | 35829.0 |
| hypothetical protein | BK664_12885 | Not Available | Negative | 2816496 - 2816834 | 12476.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
