Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit delta | BK664_12785 | Not Available | Positive | 2792645 - 2792944 | 11398.4 |
| aminomethyltransferase | BK664_12790 | Not Available | Positive | 2792941 - 2795838 | 105809.0 |
| sarcosine oxidase | BK664_12795 | Not Available | Positive | 2795842 - 2796438 | 21642.6 |
| hypothetical protein | BK664_12800 | Not Available | Positive | 2796816 - 2797055 | 9014.65 |
| ggdef domain-containing protein | BK664_12805 | Not Available | Negative | 2797313 - 2798380 | 39807.5 |
| hypothetical protein | BK664_12810 | Not Available | Positive | 2798831 - 2799055 | 8355.72 |
| hypothetical protein | BK664_12815 | Not Available | Negative | 2799432 - 2800883 | 51654.1 |
| hypothetical protein | BK664_12820 | Not Available | Negative | 2800931 - 2801494 | 20113.2 |
| mbl fold metallo-hydrolase | BK664_12825 | Not Available | Negative | 2801554 - 2802495 | 33413.7 |
| hypothetical protein | BK664_12830 | Not Available | Negative | 2802619 - 2803482 | 32016.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
