Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | BK664_12685 | Not Available | Negative | 2769519 - 2770190 | 24275.3 |
| histidine kinase | BK664_12690 | Not Available | Negative | 2770159 - 2771238 | 39427.0 |
| hypothetical protein | BK664_12695 | Not Available | Positive | 2771494 - 2772006 | 18666.4 |
| oxidoreductase | BK664_12700 | Not Available | Positive | 2772003 - 2772932 | 33856.7 |
| hypothetical protein | BK664_12705 | Not Available | Positive | 2772942 - 2773955 | 39213.6 |
| aminomethyltransferase | BK664_12710 | Not Available | Positive | 2773990 - 2775120 | 41741.7 |
| formyltetrahydrofolate deformylase | BK664_12715 | Not Available | Positive | 2775152 - 2776018 | 32572.2 |
| potassium transporter | BK664_12720 | Not Available | Positive | 2776071 - 2777438 | 52874.1 |
| aminomethyltransferase | BK664_12725 | Not Available | Positive | 2777454 - 2779796 | 86100.4 |
| amino acid permease | BK664_12730 | Not Available | Positive | 2779872 - 2781551 | 59676.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
