Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | BK664_12480 | Not Available | Positive | 2721699 - 2722361 | 23306.1 |
| dimethylmenaquinone methyltransferase | BK664_12485 | Not Available | Positive | 2722361 - 2722999 | 22284.9 |
| aspartate aminotransferase | BK664_12490 | Not Available | Positive | 2722996 - 2724210 | 43806.2 |
| phosphonopyruvate decarboxylase | BK664_12495 | Not Available | Positive | 2724523 - 2725062 | 19370.3 |
| aldehyde dehydrogenase | BK664_12500 | Not Available | Positive | 2725050 - 2725646 | 21167.5 |
| acyl-coa dehydrogenase | BK664_12505 | Not Available | Positive | 2725713 - 2726876 | 42740.9 |
| coa transferase | BK664_12510 | Not Available | Positive | 2726896 - 2728098 | 43777.3 |
| electron transporter rnfb | BK664_12515 | Not Available | Positive | 2728133 - 2728897 | 26940.9 |
| electron transfer flavoprotein subunit alpha | BK664_12520 | Not Available | Positive | 2728913 - 2729857 | 31813.1 |
| transposase | BK664_12525 | Not Available | Positive | 2729883 - 2730725 | 31290.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
