Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK664_12430 | Not Available | Positive | 2710473 - 2711369 | 32563.3 |
| coa ester lyase | BK664_12435 | Not Available | Negative | 2711410 - 2712231 | 28583.7 |
| lysr family transcriptional regulator | BK664_12440 | Not Available | Positive | 2712378 - 2713256 | 31999.7 |
| mfs transporter | BK664_12445 | Not Available | Negative | 2713346 - 2714455 | 38752.2 |
| lysr family transcriptional regulator | BK664_12450 | Not Available | Negative | 2714567 - 2715490 | 33434.1 |
| alpha-ketoglutarate permease | BK664_12455 | Not Available | Positive | 2715995 - 2717371 | 49629.2 |
| sodium:alanine symporter | BK664_12460 | Not Available | Negative | 2717435 - 2718889 | 51850.9 |
| alpha/beta hydrolase | BK664_12465 | Not Available | Negative | 2719057 - 2719875 | 29815.7 |
| lysr family transcriptional regulator | BK664_12470 | Not Available | Negative | 2720035 - 2720928 | 32270.4 |
| diguanylate cyclase | BK664_12475 | Not Available | Positive | 2721034 - 2721699 | 23571.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
