Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hupe / urej protein | BK664_12375 | Not Available | Positive | 2697029 - 2698024 | 35978.6 |
| c4-dicarboxylate transporter dcta | BK664_12385 | Not Available | Negative | 2700468 - 2701799 | 47607.7 |
| hydroxyacid dehydrogenase | BK664_12390 | Not Available | Negative | 2702068 - 2703009 | 33623.5 |
| voc family virulence protein | BK664_12395 | Not Available | Negative | 2703006 - 2703407 | 14655.8 |
| hydroxymethylglutaryl-coa lyase | BK664_12400 | Not Available | Negative | 2703404 - 2704372 | 34663.8 |
| formyl-coa transferase | BK664_12405 | Not Available | Negative | 2704387 - 2705577 | 42901.5 |
| gntr family transcriptional regulator | BK664_12410 | Not Available | Positive | 2705695 - 2706597 | 32477.3 |
| alpha-ketoglutarate permease | BK664_12415 | Not Available | Negative | 2706725 - 2708095 | 49225.3 |
| acyl-coa dehydrogenase | BK664_12420 | Not Available | Negative | 2708309 - 2709148 | 30825.8 |
| carnitine dehydratase | BK664_12425 | Not Available | Negative | 2709145 - 2710311 | 41703.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
