Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylcitrate dehydratase | BK664_12160 | Not Available | Negative | 2649418 - 2650902 | 54821.6 |
| putative methylaconitate delta-isomerase prpf | BK664_12165 | Not Available | Negative | 2651102 - 2652292 | 41383.5 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | BK664_12170 | Not Available | Negative | 2652347 - 2654944 | 94660.9 |
| 2-methylcitrate synthase | BK664_12175 | Not Available | Negative | 2655148 - 2656275 | 41892.2 |
| methylisocitrate lyase | BK664_12180 | Not Available | Negative | 2656352 - 2657242 | 31930.3 |
| gntr family transcriptional regulator | BK664_12185 | Not Available | Negative | 2657239 - 2657961 | 27364.6 |
| atp-dependent zinc protease | BK664_12190 | Not Available | Positive | 2658261 - 2658797 | 19609.6 |
| hypothetical protein | BK664_12195 | Not Available | Positive | 2658802 - 2660337 | 56825.1 |
| alpha-l-glutamate ligase-like protein | BK664_12200 | Not Available | Positive | 2660337 - 2661323 | 36320.1 |
| aminodeoxychorismate synthase, component i | BK664_12205 | Not Available | Positive | 2661647 - 2662984 | 48987.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
