Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_12060 | Not Available | Negative | 2629300 - 2629776 | 17100.9 |
| hypothetical protein | BK664_12065 | Not Available | Negative | 2629781 - 2630278 | 18410.0 |
| hypothetical protein | BK664_12070 | Not Available | Positive | 2630469 - 2631164 | 24243.5 |
| hypothetical protein | BK664_12075 | Not Available | Positive | 2631256 - 2631972 | 24827.2 |
| hypothetical protein | BK664_12080 | Not Available | Positive | 2632121 - 2632399 | 10356.2 |
| collagen pro alpha-chain precursor | BK664_12085 | Not Available | Positive | 2632392 - 2633150 | 25183.2 |
| hypothetical protein | BK664_12090 | Not Available | Negative | 2633261 - 2633719 | 16735.4 |
| atp-dependent dna helicase ding | BK664_12095 | Not Available | Positive | 2633819 - 2635963 | 78689.1 |
| beta-agarase | BK664_12100 | Not Available | Positive | 2636059 - 2638575 | 90742.4 |
| esta family serine hydrolase | BK664_12105 | Not Available | Positive | 2638715 - 2639860 | 41219.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
