Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | BK664_12010 | Not Available | Negative | 2618854 - 2619564 | 26554.7 |
| amino acid abc transporter permease | BK664_12015 | Not Available | Negative | 2619561 - 2620289 | 26904.6 |
| abc transporter substrate-binding protein | BK664_12020 | Not Available | Negative | 2620346 - 2621128 | 27651.1 |
| atp-dependent dna ligase | BK664_12025 | Not Available | Negative | 2621462 - 2623150 | 63025.6 |
| dna ligase-associated dexh box helicase | BK664_12030 | Not Available | Negative | 2623147 - 2624181 | 37828.8 |
| penicillin acylase family protein | BK664_12035 | Not Available | Negative | 2624379 - 2626829 | 89184.8 |
| thiol:disulfide oxidoreductase | BK664_12040 | Not Available | Negative | 2627074 - 2627718 | 24357.2 |
| cysteine hydrolase | BK664_12045 | Not Available | Positive | 2627865 - 2628422 | 20428.1 |
| zinc chelation protein secc | BK664_12050 | Not Available | Negative | 2628555 - 2628764 | 7690.74 |
| hypothetical protein | BK664_12055 | Not Available | Negative | 2628761 - 2629255 | 18975.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
