Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_11960 | Not Available | Negative | 2609258 - 2610211 | 35566.9 |
| proline--trna ligase | BK664_11965 | Not Available | Negative | 2610229 - 2611944 | 63178.7 |
| ampg family muropeptide mfs transporter | BK664_11970 | Not Available | Negative | 2612089 - 2613654 | 56820.7 |
| dna base-flipping protein ybaz | BK664_11975 | Not Available | Negative | 2613699 - 2614052 | 12655.1 |
| peptide chain release factor rf-3 | BK664_11980 | Not Available | Positive | 2614216 - 2615223 | 37765.1 |
| cold-shock protein | BK664_11985 | Not Available | Negative | 2615395 - 2615604 | 7727.11 |
| dctp deaminase | BK664_11990 | Not Available | Positive | 2615959 - 2616525 | 21301.3 |
| hypothetical protein | BK664_11995 | Not Available | Positive | 2616632 - 2616841 | 7208.53 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK664_12000 | Not Available | Negative | 2616933 - 2617697 | 28335.3 |
| succinylglutamate desuccinylase | BK664_12005 | Not Available | Negative | 2617711 - 2618829 | 40646.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
