Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin--nadp(+) reductase | BK664_11860 | Not Available | Positive | 2590710 - 2591489 | 29713.6 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | BK664_11865 | Not Available | Negative | 2591594 - 2592295 | 25922.2 |
| 3-oxoacyl-acp reductase | BK664_11870 | Not Available | Negative | 2592481 - 2593251 | 27332.9 |
| hypothetical protein | BK664_11875 | Not Available | Negative | 2593388 - 2593858 | 18011.0 |
| rna-binding protein | BK664_11880 | Not Available | Negative | 2593934 - 2594644 | 26272.9 |
| gnat family n-acetyltransferase | BK664_11885 | Not Available | Negative | 2594727 - 2595200 | 18039.7 |
| ribosomal protein s12 methylthiotransferase | BK664_11890 | Not Available | Negative | 2595313 - 2596650 | 49430.3 |
| potassium transporter kup | BK664_11895 | Not Available | Positive | 2596939 - 2598840 | 68256.9 |
| phd-yefm | BK664_11900 | Not Available | Positive | 2599151 - 2599441 | 10914.0 |
| plasmid stabilization protein | BK664_11905 | Not Available | Positive | 2599453 - 2599740 | 10552.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
