Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage-inducible protein cina | BK664_11810 | Not Available | Positive | 2583112 - 2583612 | 17676.9 |
| recombinase reca | BK664_11815 | Not Available | Positive | 2583696 - 2584748 | 37272.1 |
| recombination regulator recx | BK664_11820 | Not Available | Positive | 2584757 - 2585224 | 18123.8 |
| rossman fold protein, tigr00730 family | BK664_11825 | Not Available | Negative | 2585266 - 2586384 | 42217.3 |
| hypothetical protein | BK664_11830 | Not Available | Positive | 2586767 - 2586961 | 7565.0 |
| hypothetical protein | BK664_11835 | Not Available | Negative | 2586962 - 2587387 | 15277.2 |
| dtw domain-containing protein | BK664_11840 | Not Available | Positive | 2587577 - 2588335 | 28761.4 |
| dna-binding response regulator | BK664_11845 | Not Available | Positive | 2588546 - 2589193 | 23400.3 |
| diacylglycerol kinase | BK664_11850 | Not Available | Positive | 2589274 - 2589636 | 12859.2 |
| lysr family transcriptional regulator | BK664_11855 | Not Available | Negative | 2589633 - 2590559 | 34277.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
