Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase | BK664_11760 | Not Available | Positive | 2573543 - 2574220 | 25195.8 |
| peptigoglycan-binding protein lysm | BK664_11765 | Not Available | Positive | 2574432 - 2575289 | 30327.3 |
| rna polymerase sigma factor rpos | BK664_11770 | Not Available | Positive | 2575395 - 2576402 | 38118.4 |
| ferredoxin | BK664_11775 | Not Available | Negative | 2576885 - 2577208 | 12220.5 |
| dna mismatch repair protein muts | BK664_11780 | Not Available | Negative | 2577351 - 2579930 | 95192.8 |
| transcriptional regulator | BK664_11785 | Not Available | Positive | 2580142 - 2580876 | 27369.4 |
| pyocin r2, holin | BK664_11790 | Not Available | Positive | 2581382 - 2581729 | 12347.3 |
| hypothetical protein | BK664_11795 | Not Available | Positive | 2581747 - 2581953 | 7419.79 |
| lysozyme | BK664_11800 | Not Available | Positive | 2581950 - 2582513 | 20788.7 |
| lysis protein | BK664_11805 | Not Available | Positive | 2582495 - 2583031 | 19334.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
