Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-8-phosphooctulonate synthase | BK664_11710 | Not Available | Positive | 2564793 - 2565638 | 30722.4 |
| phosphopyruvate hydratase | BK664_11715 | Not Available | Positive | 2565795 - 2567084 | 45508.0 |
| cell division protein ftsb | BK664_11720 | Not Available | Positive | 2567255 - 2567533 | 10464.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | BK664_11725 | Not Available | Positive | 2567530 - 2568237 | 25872.8 |
| lysr family transcriptional regulator | BK664_11730 | Not Available | Negative | 2568264 - 2569160 | 34143.1 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | BK664_11735 | Not Available | Positive | 2569268 - 2570380 | 39173.6 |
| s-formylglutathione hydrolase | BK664_11740 | Not Available | Positive | 2570389 - 2571234 | 31240.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | BK664_11745 | Not Available | Positive | 2571278 - 2571751 | 16711.2 |
| trna pseudouridine(13) synthase trud | BK664_11750 | Not Available | Positive | 2571748 - 2572806 | 38657.1 |
| 5'/3'-nucleotidase sure | BK664_11755 | Not Available | Positive | 2572794 - 2573543 | 26557.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
