Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | BK664_11610 | Not Available | Negative | 2540924 - 2541706 | 28823.9 |
| 30s ribosomal protein s2 | BK664_11615 | Not Available | Positive | 2542080 - 2542817 | 27110.9 |
| translation elongation factor ts | BK664_11620 | Not Available | Positive | 2543010 - 2543873 | 30350.6 |
| ump kinase | BK664_11625 | Not Available | Positive | 2544083 - 2544826 | 26592.5 |
| ribosome recycling factor | BK664_11630 | Not Available | Positive | 2544823 - 2545380 | 20623.8 |
| di-trans,poly-cis-decaprenylcistransferase | BK664_11635 | Not Available | Positive | 2545394 - 2546149 | 28214.7 |
| phosphatidate cytidylyltransferase | BK664_11640 | Not Available | Positive | 2546149 - 2546955 | 28850.4 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | BK664_11645 | Not Available | Positive | 2546952 - 2548142 | 42250.1 |
| rip metalloprotease rsep | BK664_11650 | Not Available | Positive | 2548196 - 2549548 | 48605.8 |
| outer membrane protein assembly factor bama | BK664_11655 | Not Available | Positive | 2549623 - 2552001 | 87085.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
