Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-(1-3)-glucosyl transferase | BK664_11290 | Not Available | Negative | 2487807 - 2490398 | 97379.0 |
| trna threonylcarbamoyladenosine dehydratase | BK664_11295 | Not Available | Positive | 2490682 - 2491497 | 29165.3 |
| fe-s metabolism protein sufe | BK664_11300 | Not Available | Negative | 2491599 - 2492003 | 14818.8 |
| cysteine sulfinate desulfinase | BK664_11305 | Not Available | Negative | 2492000 - 2493205 | 43370.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | BK664_11310 | Not Available | Negative | 2493298 - 2494332 | 36044.4 |
| arsenate reductase | BK664_11315 | Not Available | Negative | 2494365 - 2494727 | 13910.8 |
| lysis protein | BK664_11590 | Not Available | Positive | 2535527 - 2536057 | 18606.0 |
| hypothetical protein | BK664_11595 | Not Available | Negative | 2536026 - 2536364 | 13397.9 |
| succinyldiaminopimelate transaminase | BK664_11600 | Not Available | Negative | 2536933 - 2538132 | 44192.9 |
| [protein-pii] uridylyltransferase | BK664_11605 | Not Available | Negative | 2538176 - 2540878 | 103053.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
