Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase response regulator | BK664_11140 | Not Available | Positive | 2454706 - 2455707 | 37059.4 |
| peptide chain release factor 2 | BK664_11145 | Not Available | Positive | 2456234 - 2457115 | 32722.3 |
| lysine--trna ligase | BK664_11150 | Not Available | Positive | 2457187 - 2458689 | 57088.1 |
| tetr family transcriptional regulator | BK664_11155 | Not Available | Positive | 2458792 - 2459508 | 26591.8 |
| hypothetical protein | BK664_11160 | Not Available | Positive | 2459657 - 2460211 | 20748.7 |
| hypothetical protein | BK664_11165 | Not Available | Positive | 2460249 - 2461526 | 48259.2 |
| alpha/beta hydrolase | BK664_11170 | Not Available | Positive | 2461663 - 2462577 | 34000.1 |
| hypothetical protein | BK664_11175 | Not Available | Positive | 2462574 - 2462903 | 11958.7 |
| hypothetical protein | BK664_11180 | Not Available | Negative | 2462977 - 2463765 | 28349.4 |
| chromosome partitioning protein para | BK664_11185 | Not Available | Negative | 2463815 - 2464228 | 14853.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
