Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | BK664_10940 | Not Available | Negative | 2411112 - 2412356 | 45842.4 |
| inner membrane protein ypjd | BK664_10945 | Not Available | Negative | 2412369 - 2413181 | 29353.1 |
| signal recognition particle protein | BK664_10950 | Not Available | Positive | 2413392 - 2414768 | 49342.9 |
| 30s ribosomal protein s16 | BK664_10955 | Not Available | Positive | 2415018 - 2415269 | 9192.01 |
| ribosome maturation factor rimm | BK664_10960 | Not Available | Positive | 2415275 - 2415811 | 19981.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | BK664_10965 | Not Available | Positive | 2415814 - 2416566 | 27928.1 |
| 50s ribosomal protein l19 | BK664_10970 | Not Available | Positive | 2416612 - 2416962 | 12969.9 |
| site-specific tyrosine recombinase xerd | BK664_10975 | Not Available | Positive | 2417107 - 2418003 | 33952.3 |
| protein-disulfide isomerase | BK664_10980 | Not Available | Positive | 2418177 - 2418908 | 26154.7 |
| homoserine dehydrogenase | BK664_10985 | Not Available | Positive | 2419043 - 2420347 | 46216.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
