Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--trna ligase | BK664_10790 | Not Available | Negative | 2375609 - 2378455 | 107428.0 |
| dna polymerase iii subunit chi | BK664_10795 | Not Available | Negative | 2378673 - 2379068 | 14276.0 |
| dna polymerase iii subunit chi | BK664_10800 | Not Available | Negative | 2379077 - 2379505 | 16097.2 |
| leucyl aminopeptidase | BK664_10805 | Not Available | Negative | 2379566 - 2381056 | 52461.6 |
| lps export abc transporter permease lptf | BK664_10810 | Not Available | Positive | 2381363 - 2382481 | 41421.1 |
| lps export abc transporter permease lptg | BK664_10815 | Not Available | Positive | 2382474 - 2383535 | 38703.5 |
| elongation factor 4 | BK664_10820 | Not Available | Positive | 2383707 - 2385506 | 66457.2 |
| signal peptidase i | BK664_10825 | Not Available | Positive | 2385512 - 2386366 | 31812.8 |
| ribonuclease iii | BK664_10830 | Not Available | Positive | 2386551 - 2387240 | 25474.7 |
| gtpase era | BK664_10835 | Not Available | Positive | 2387233 - 2388135 | 33969.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
