Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_10690 | Not Available | Negative | 2356654 - 2357310 | 24577.2 |
| fad-dependent oxidoreductase | BK664_10695 | Not Available | Negative | 2357403 - 2358530 | 40461.9 |
| ornithine cyclodeaminase | BK664_10700 | Not Available | Negative | 2358595 - 2359542 | 33956.9 |
| atp-dependent rna helicase rhlb | BK664_10705 | Not Available | Negative | 2359669 - 2361156 | 54965.0 |
| carboxylesterase | BK664_10710 | Not Available | Negative | 2361255 - 2361911 | 24136.0 |
| amino acid abc transporter substrate-binding protein | BK664_10715 | Not Available | Positive | 2362379 - 2363407 | 36575.6 |
| amino acid abc transporter permease | BK664_10720 | Not Available | Positive | 2363473 - 2364654 | 43321.8 |
| amino acid abc transporter permease | BK664_10725 | Not Available | Positive | 2364665 - 2365762 | 40691.0 |
| glutamine abc transporter atp-binding protein | BK664_10730 | Not Available | Positive | 2365773 - 2366537 | 28866.4 |
| transcriptional regulator | BK664_10735 | Not Available | Negative | 2366605 - 2367087 | 18150.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
