Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | BK664_10540 | Not Available | Positive | 2320972 - 2321919 | 34349.2 |
| cell division protein ftsl | BK664_10545 | Not Available | Positive | 2321916 - 2322209 | 10864.3 |
| cell division protein | BK664_10550 | Not Available | Positive | 2322206 - 2323948 | 62959.6 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | BK664_10555 | Not Available | Positive | 2323948 - 2325411 | 52110.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BK664_10560 | Not Available | Positive | 2325404 - 2326771 | 47329.7 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | BK664_10565 | Not Available | Positive | 2326771 - 2327853 | 39375.3 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | BK664_10570 | Not Available | Positive | 2327859 - 2329205 | 48103.6 |
| putative lipid ii flippase ftsw | BK664_10575 | Not Available | Positive | 2329202 - 2330419 | 44346.5 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | BK664_10580 | Not Available | Positive | 2330409 - 2331479 | 37841.1 |
| udp-n-acetylmuramate--l-alanine ligase | BK664_10585 | Not Available | Positive | 2331472 - 2332932 | 52459.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
