Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01777 family protein | BK664_10285 | Not Available | Positive | 2269528 - 2270430 | 32886.2 |
| ferrochelatase | BK664_10290 | Not Available | Positive | 2270444 - 2271469 | 38444.4 |
| uracil permease | BK664_10295 | Not Available | Negative | 2271509 - 2272783 | 44207.6 |
| uracil phosphoribosyltransferase | BK664_10300 | Not Available | Negative | 2272786 - 2273424 | 22920.2 |
| hypoxanthine-guanine phosphoribosyltransferase | BK664_10305 | Not Available | Positive | 2273590 - 2274147 | 20695.8 |
| cupin | BK664_10310 | Not Available | Positive | 2274151 - 2274624 | 17252.6 |
| c4-dicarboxylic acid transporter daua | BK664_10315 | Not Available | Negative | 2274634 - 2276355 | 60968.5 |
| hypothetical protein | BK664_10320 | Not Available | Positive | 2276507 - 2276992 | 17977.8 |
| hypothetical protein | BK664_10325 | Not Available | Positive | 2277055 - 2277342 | 10855.9 |
| malate:quinone oxidoreductase | BK664_10330 | Not Available | Negative | 2277515 - 2279023 | 54524.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
