Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redox-regulated atpase ychf | BK664_10185 | Not Available | Negative | 2250976 - 2252076 | 40049.3 |
| aminoacyl-trna hydrolase | BK664_10190 | Not Available | Negative | 2252099 - 2252683 | 20948.3 |
| 50s ribosomal protein l25/general stress protein ctc | BK664_10195 | Not Available | Negative | 2252853 - 2253458 | 21378.8 |
| ribose-phosphate pyrophosphokinase | BK664_10200 | Not Available | Negative | 2253600 - 2254541 | 34194.4 |
| Trna-gln | Not Available | Not Available | Positive | 2254587 - 2254661 | Not Available |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | BK664_10210 | Not Available | Negative | 2254699 - 2255550 | 30677.1 |
| lipoprotein localization factor lolb | BK664_10215 | Not Available | Negative | 2255553 - 2256170 | 23092.5 |
| hypothetical protein | BK664_10220 | Not Available | Negative | 2256175 - 2257899 | 64217.9 |
| glutamyl-trna reductase | BK664_10225 | Not Available | Positive | 2258082 - 2259371 | 46926.4 |
| peptide chain release factor 1 | BK664_10230 | Not Available | Positive | 2259368 - 2260450 | 40032.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
