Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | BK664_10135 | Not Available | Negative | 2239258 - 2240067 | 30504.4 |
| duf2975 domain-containing protein | BK664_10140 | Not Available | Positive | 2240232 - 2240792 | 20675.6 |
| cro/cl family transcriptional regulator | BK664_10145 | Not Available | Positive | 2240800 - 2241012 | 7545.57 |
| d-alanine--d-alanine ligase a | BK664_10150 | Not Available | Positive | 2241140 - 2242234 | 39034.0 |
| cell filamentation protein fic | BK664_10155 | Not Available | Negative | 2242410 - 2243564 | 43384.1 |
| gamma-glutamyltransferase | BK664_10160 | Not Available | Negative | 2243827 - 2245659 | 64243.8 |
| hypothetical protein | BK664_10165 | Not Available | Positive | 2245823 - 2246932 | 40820.4 |
| Trna-met | Not Available | Not Available | Positive | 2247078 - 2247154 | Not Available |
| chemotaxis protein | BK664_10175 | Not Available | Negative | 2247271 - 2249328 | 73193.7 |
| mfs transporter | BK664_10180 | Not Available | Positive | 2249660 - 2250877 | 43290.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
