Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine kinase/phosphatase | BK664_10085 | Not Available | Negative | 2229676 - 2230080 | 14899.5 |
| carbonic anhydrase | BK664_10090 | Not Available | Positive | 2230233 - 2230877 | 24370.1 |
| lysine methyltransferase | BK664_10095 | Not Available | Negative | 2230884 - 2231408 | 20031.0 |
| hypothetical protein | BK664_10100 | Not Available | Negative | 2231553 - 2232725 | 42421.3 |
| short chain fatty acid transporter | BK664_10105 | Not Available | Negative | 2232837 - 2234255 | 50843.9 |
| mfs transporter | BK664_10110 | Not Available | Positive | 2234457 - 2235800 | 48108.5 |
| hypothetical protein | BK664_10115 | Not Available | Negative | 2235890 - 2236285 | 14216.8 |
| chemotaxis protein | BK664_10120 | Not Available | Positive | 2236827 - 2238143 | 48049.8 |
| flavin reductase | BK664_10125 | Not Available | Positive | 2238201 - 2238800 | 21858.2 |
| cupin | BK664_10130 | Not Available | Negative | 2238813 - 2239181 | 13996.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
