Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein involved in rimo-mediated beta-methylthiolation of ribosomal protein s12 ycao | BK664_09935 | Not Available | Negative | 2192501 - 2194705 | 82326.2 |
| hypothetical protein | BK664_09940 | Not Available | Negative | 2194827 - 2195984 | 43956.9 |
| hypothetical protein | BK664_09945 | Not Available | Negative | 2195997 - 2196713 | 25227.0 |
| hypothetical protein | BK664_09950 | Not Available | Negative | 2196732 - 2197160 | 14879.6 |
| hypothetical protein | BK664_09955 | Not Available | Negative | 2197176 - 2197853 | 24953.2 |
| potassium channel protein | BK664_09960 | Not Available | Negative | 2197840 - 2198874 | 36737.7 |
| rhomboid family intramembrane serine protease | BK664_09965 | Not Available | Negative | 2198946 - 2199509 | 19892.9 |
| phage shock protein a | BK664_09970 | Not Available | Negative | 2199663 - 2200361 | 25211.7 |
| hypothetical protein | BK664_09975 | Not Available | Negative | 2200386 - 2200967 | 21376.6 |
| cysteine hydrolase | BK664_09980 | Not Available | Negative | 2201250 - 2201804 | 19873.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
