Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s13 | BK664_09885 | Not Available | Positive | 2182227 - 2182583 | 13340.5 |
| 30s ribosomal protein s11 | BK664_09890 | Not Available | Positive | 2182614 - 2183003 | 13616.4 |
| 30s ribosomal protein s4 | BK664_09895 | Not Available | Positive | 2183022 - 2183642 | 23077.7 |
| dna-directed rna polymerase subunit alpha | BK664_09900 | Not Available | Positive | 2183665 - 2184666 | 36633.9 |
| 50s ribosomal protein l17 | BK664_09905 | Not Available | Positive | 2184709 - 2185095 | 14428.6 |
| catalase | BK664_09910 | Not Available | Positive | 2185336 - 2186790 | 54141.3 |
| bacterioferritin | BK664_09915 | Not Available | Positive | 2186940 - 2187404 | 18178.8 |
| excinuclease abc subunit a | BK664_09920 | Not Available | Negative | 2187472 - 2190306 | 104173.0 |
| mfs transporter | BK664_09925 | Not Available | Positive | 2190498 - 2191895 | 49495.2 |
| single-stranded dna-binding protein | BK664_09930 | Not Available | Positive | 2191905 - 2192435 | 19442.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
