Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_09525 | Not Available | Positive | 2127660 - 2128121 | 15543.3 |
| laci family transcriptional regulator | BK664_09530 | Not Available | Positive | 2128318 - 2129274 | 33404.6 |
| sugar abc transporter atp-binding protein | BK664_09535 | Not Available | Positive | 2129331 - 2130884 | 55662.6 |
| abc transporter permease | BK664_09540 | Not Available | Positive | 2130881 - 2131858 | 33506.7 |
| laci family transcriptional regulator | BK664_09545 | Not Available | Positive | 2131862 - 2132881 | 36451.0 |
| ribokinase | BK664_09550 | Not Available | Positive | 2132939 - 2133856 | 30801.8 |
| d-ribose pyranase | BK664_09555 | Not Available | Positive | 2133853 - 2134257 | 14385.8 |
| nucleoside hydrolase | BK664_09560 | Not Available | Positive | 2134301 - 2135329 | 37030.8 |
| hypothetical protein | BK664_09565 | Not Available | Negative | 2135368 - 2135574 | 7409.85 |
| hypothetical protein | BK664_09570 | Not Available | Positive | 2135707 - 2136012 | 11019.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
