Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sepl/tyea/hrpj family type iii secretion system gatekeeper | BK664_09475 | Not Available | Negative | 2117307 - 2118407 | 39922.3 |
| rna polymerase subunit sigma | BK664_09480 | Not Available | Positive | 2118652 - 2119188 | 20393.6 |
| type iii effector hrpk | BK664_09485 | Not Available | Positive | 2119271 - 2121502 | 76805.0 |
| hypothetical protein | BK664_09490 | Not Available | Positive | 2121553 - 2123037 | 49912.0 |
| hypothetical protein | BK664_09495 | Not Available | Positive | 2123255 - 2123710 | 16473.0 |
| carbon storage regulator | BK664_09500 | Not Available | Negative | 2123891 - 2124085 | 6950.48 |
| penicillin-binding protein activator lpob | BK664_09505 | Not Available | Positive | 2124336 - 2124701 | 12908.7 |
| deoxyribonuclease | BK664_09510 | Not Available | Negative | 2125068 - 2125757 | 26160.4 |
| hypothetical protein | BK664_09515 | Not Available | Negative | 2125762 - 2126052 | 10955.9 |
| l-asparaginase | BK664_09520 | Not Available | Negative | 2126223 - 2127311 | 38841.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
