Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_09375 | Not Available | Positive | 2100981 - 2101511 | 19667.6 |
| hypothetical protein | BK664_09380 | Not Available | Positive | 2101534 - 2102109 | 21044.8 |
| type iii secretion protein | BK664_09385 | Not Available | Positive | 2102207 - 2102431 | 7883.15 |
| type iii secretion protein | BK664_09390 | Not Available | Positive | 2102418 - 2102849 | 15234.0 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | BK664_09395 | Not Available | Positive | 2102851 - 2104920 | 74652.2 |
| type iii secretion protein | BK664_09400 | Not Available | Positive | 2104917 - 2105126 | 7662.24 |
| type iii secretion protein hrpv | BK664_09405 | Not Available | Positive | 2105132 - 2105491 | 13455.0 |
| hypothetical protein | BK664_09410 | Not Available | Negative | 2105485 - 2107014 | 53658.8 |
| hypothetical protein | BK664_09415 | Not Available | Negative | 2107005 - 2107943 | 33202.0 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | BK664_09420 | Not Available | Negative | 2108019 - 2109095 | 40391.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
