Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 2069963 - 2070039 | Not Available |
| rna polymerase subunit sigma | BK664_09225 | Not Available | Positive | 2070432 - 2070941 | 19511.3 |
| sugar abc transporter substrate-binding protein | BK664_09230 | Not Available | Positive | 2070938 - 2071888 | 34854.1 |
| tonb-dependent receptor | BK664_09235 | Not Available | Positive | 2071956 - 2074379 | 87676.2 |
| diaminobutyrate--2-oxoglutarate transaminase | BK664_09240 | Not Available | Positive | 2074735 - 2076111 | 49431.8 |
| acsd protein | BK664_09245 | Not Available | Positive | 2076324 - 2078108 | 66447.7 |
| diaminopimelate decarboxylase | BK664_09250 | Not Available | Positive | 2078101 - 2079312 | 44421.3 |
| mfs transporter | BK664_09255 | Not Available | Positive | 2079309 - 2080736 | 50023.4 |
| acsc protein | BK664_09260 | Not Available | Positive | 2080756 - 2082627 | 70951.2 |
| siderophore biosynthesis protein sbng | BK664_09265 | Not Available | Positive | 2082621 - 2083394 | 27572.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
