Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | BK664_09120 | Not Available | Negative | 2046426 - 2049704 | 122668.0 |
| lysr family transcriptional regulator | BK664_09125 | Not Available | Negative | 2049771 - 2050661 | 32563.7 |
| 3-isopropylmalate dehydratase large subunit | BK664_09130 | Not Available | Positive | 2050815 - 2052233 | 50701.7 |
| 3-isopropylmalate dehydratase small subunit | BK664_09135 | Not Available | Positive | 2052244 - 2052888 | 24429.7 |
| sam-dependent methyltransferase | BK664_09140 | Not Available | Positive | 2053044 - 2053811 | 28132.1 |
| 3-isopropylmalate dehydrogenase | BK664_09145 | Not Available | Positive | 2053884 - 2054966 | 38734.9 |
| aspartate-semialdehyde dehydrogenase | BK664_09150 | Not Available | Positive | 2055036 - 2056148 | 40471.1 |
| aspartate-semialdehyde dehydrogenase | BK664_09155 | Not Available | Positive | 2056332 - 2057342 | 35717.9 |
| peptidoglycan-binding protein | BK664_09160 | Not Available | Positive | 2057550 - 2060381 | 98948.7 |
| trna pseudouridine(38-40) synthase trua | BK664_09165 | Not Available | Positive | 2060691 - 2061515 | 31092.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
