Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase | BK654_09165 | Not Available | Negative | 2127761 - 2129434 | 60690.6 |
| spermidine synthase | BK654_09170 | Not Available | Negative | 2129928 - 2130683 | 28048.8 |
| 3-deoxy-7-phosphoheptulonate synthase | BK654_09175 | Not Available | Positive | 2130839 - 2132185 | 49902.3 |
| cytoplasmic protein | BK654_09180 | Not Available | Negative | 2132313 - 2133542 | 46529.9 |
| hypothetical protein | BK654_09185 | Not Available | Negative | 2133607 - 2133825 | 8394.07 |
| lysr family transcriptional regulator | BK654_09190 | Not Available | Positive | 2133887 - 2134777 | 33519.7 |
| hypothetical protein | BK654_09195 | Not Available | Negative | 2134767 - 2135516 | 26256.1 |
| marr family transcriptional regulator | BK654_09200 | Not Available | Positive | 2135661 - 2136122 | 17253.1 |
| organic hydroperoxide resistance protein | BK654_09205 | Not Available | Positive | 2136480 - 2136899 | 14260.9 |
| alpha/beta hydrolase | BK654_09210 | Not Available | Positive | 2136936 - 2137949 | 35988.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
