Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 2027729 - 2027804 | Not Available |
| hypothetical protein | BK664_09025 | Not Available | Positive | 2028032 - 2028262 | 7923.32 |
| hypothetical protein | BK664_09030 | Not Available | Negative | 2028259 - 2028459 | 7204.83 |
| aromatic amino acid aminotransferase | BK664_09035 | Not Available | Negative | 2028707 - 2029903 | 43261.8 |
| excinuclease abc subunit b | BK664_09040 | Not Available | Positive | 2030256 - 2032271 | 75739.7 |
| emrb/qaca family drug resistance transporter | BK664_09045 | Not Available | Negative | 2032398 - 2033948 | 55898.5 |
| transporter | BK664_09050 | Not Available | Negative | 2033938 - 2034987 | 38231.5 |
| glutamate--trna ligase | BK664_09055 | Not Available | Positive | 2035207 - 2036688 | 56302.0 |
| Trna-ala | Not Available | Not Available | Positive | 2036879 - 2036954 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2037034 - 2037109 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
