Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arti protein | BK664_08905 | Not Available | Negative | 2004404 - 2005189 | 29170.2 |
| copper-binding protein | BK664_08910 | Not Available | Negative | 2005275 - 2005544 | 9116.77 |
| hypothetical protein | BK664_08915 | Not Available | Negative | 2005644 - 2006036 | 14186.6 |
| copper resistance protein copc | BK664_08925 | Not Available | Negative | 2007266 - 2007637 | 12948.0 |
| copper resistance protein copb | BK664_08930 | Not Available | Negative | 2007693 - 2008580 | 32631.0 |
| copper oxidase | BK664_08935 | Not Available | Negative | 2008592 - 2010289 | 63120.4 |
| hypothetical protein | BK664_08940 | Not Available | Negative | 2010400 - 2011104 | 25357.5 |
| murein l,d-transpeptidase | BK664_08945 | Not Available | Positive | 2011185 - 2012942 | 64319.8 |
| lipopolysaccharide biosynthesis protein | BK664_08950 | Not Available | Positive | 2013137 - 2013928 | 29752.9 |
| hypothetical protein | BK664_08955 | Not Available | Positive | 2014094 - 2014489 | 14359.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
