Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein apbe | BK664_08805 | Not Available | Positive | 1985988 - 1986974 | 35684.9 |
| nad(p)(+) transhydrogenase | BK664_08810 | Not Available | Positive | 1987182 - 1988576 | 50899.7 |
| glycerophosphodiester phosphodiesterase | BK664_08815 | Not Available | Negative | 1988619 - 1989341 | 26839.3 |
| pilus assembly protein pilz | BK664_08820 | Not Available | Negative | 1989356 - 1989937 | 21796.1 |
| cell division protein ftsx | BK664_08825 | Not Available | Positive | 1990032 - 1991282 | 45269.0 |
| lipoprotein releasing system, atp-binding protein | BK664_08830 | Not Available | Positive | 1991275 - 1991973 | 25236.7 |
| multidrug abc transporter substrate-binding protein | BK664_08835 | Not Available | Positive | 1992038 - 1993282 | 44256.9 |
| two-component sensor histidine kinase | BK664_08840 | Not Available | Negative | 1993406 - 1994755 | 49904.8 |
| dna-binding response regulator | BK664_08845 | Not Available | Negative | 1994755 - 1995435 | 25447.9 |
| copper-binding protein | BK664_08850 | Not Available | Positive | 1995591 - 1996112 | 18814.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
