Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | BK664_08705 | Not Available | Positive | 1957251 - 1959170 | 70563.5 |
| universal stress protein uspa | BK664_08710 | Not Available | Negative | 1959237 - 1959674 | 16097.5 |
| hypothetical protein | BK664_08715 | Not Available | Positive | 1959779 - 1960216 | 16785.5 |
| multifunctional fatty acid oxidation complex subunit alpha | BK664_08720 | Not Available | Positive | 1960757 - 1962904 | 77548.4 |
| 3-ketoacyl-coa thiolase | BK664_08725 | Not Available | Positive | 1962934 - 1964109 | 41680.7 |
| tonb box-like protein | BK664_08730 | Not Available | Positive | 1964210 - 1964446 | 9073.74 |
| dna topoisomerase i | BK664_08735 | Not Available | Positive | 1964561 - 1967194 | 97531.6 |
| pasa protein | BK664_08740 | Not Available | Positive | 1967336 - 1967860 | 19397.4 |
| hypothetical protein | BK664_08745 | Not Available | Positive | 1968015 - 1968248 | 8474.05 |
| cdp-glycerol--udp-pyrophosphoryl-n- acetylglucosaminyl-n-acetylmannosamine glycerophosphotransferase | BK664_08750 | Not Available | Negative | 1968343 - 1968816 | 17371.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
