Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein | BK664_08655 | Not Available | Negative | 1942693 - 1944258 | 56910.3 |
| caax protease family protein | BK664_08660 | Not Available | Negative | 1944362 - 1945153 | 28685.9 |
| aconitate hydratase 1 | BK664_08665 | Not Available | Negative | 1945387 - 1948128 | 99246.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | BK664_08670 | Not Available | Positive | 1948351 - 1949424 | 40595.3 |
| sulfurtransferase tusa | BK664_08675 | Not Available | Positive | 1949619 - 1949870 | 9360.43 |
| mate family efflux transporter | BK664_08680 | Not Available | Negative | 1949867 - 1951276 | 49863.3 |
| 4-phosphoerythronate dehydrogenase | BK664_08685 | Not Available | Positive | 1951578 - 1952720 | 41636.8 |
| hypothetical protein | BK664_08690 | Not Available | Negative | 1952835 - 1953014 | 6657.95 |
| abc transporter atp-binding protein | BK664_08695 | Not Available | Positive | 1953282 - 1955060 | 64489.0 |
| lytic murein transglycosylase | BK664_08700 | Not Available | Negative | 1955109 - 1957037 | 73855.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
