Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | BK664_08250 | Not Available | Negative | 1858384 - 1859835 | 53743.3 |
| alginate o-acetyltransferase | BK664_08255 | Not Available | Negative | 1859942 - 1860598 | 22872.3 |
| alginate o-acetyltransferase | BK664_08260 | Not Available | Negative | 1860616 - 1861791 | 43536.8 |
| membrane-bound o-acyltransferase family protein | BK664_08265 | Not Available | Negative | 1861803 - 1863368 | 58845.0 |
| poly(beta-d-mannuronate) lyase | BK664_08270 | Not Available | Negative | 1863566 - 1864690 | 42208.0 |
| alginate o-acetyltransferase | BK664_08275 | Not Available | Negative | 1864698 - 1866149 | 53577.2 |
| poly(beta-d-mannuronate) c5 epimerase | BK664_08280 | Not Available | Negative | 1866160 - 1867749 | 58249.7 |
| transcriptional regulator | BK664_08285 | Not Available | Negative | 1867776 - 1869263 | 54422.8 |
| alginate biosynthesis protein | BK664_08290 | Not Available | Negative | 1869260 - 1870666 | 50842.4 |
| hemolysin d | BK664_08295 | Not Available | Negative | 1870679 - 1871848 | 42095.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
