Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_08195 | Not Available | Negative | 1845708 - 1846217 | 20028.6 |
| bifunctional glyoxylate/hydroxypyruvate reductase b | BK664_08200 | Not Available | Negative | 1846359 - 1847333 | 35289.6 |
| lysr family transcriptional regulator | BK664_08205 | Not Available | Negative | 1847476 - 1848444 | 35182.2 |
| rnd transporter | BK664_08210 | Not Available | Positive | 1848637 - 1850148 | 54003.0 |
| fusc family protein | BK664_08215 | Not Available | Positive | 1850159 - 1852339 | 79972.4 |
| duf1656 domain-containing protein | BK664_08220 | Not Available | Positive | 1852329 - 1852529 | 7691.64 |
| efflux transporter periplasmic adaptor subunit | BK664_08225 | Not Available | Positive | 1852555 - 1853403 | 31871.3 |
| duf4440 domain-containing protein | BK664_08230 | Not Available | Negative | 1853460 - 1853858 | 15046.8 |
| short-chain dehydrogenase | BK664_08235 | Not Available | Negative | 1854006 - 1854830 | 28671.9 |
| multidrug transporter | BK664_08240 | Not Available | Negative | 1854863 - 1855327 | 17285.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
