Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK664_08145 | Not Available | Positive | 1835379 - 1836326 | 35525.8 |
| ribosomal subunit interface protein | BK664_08150 | Not Available | Positive | 1836540 - 1836950 | 15391.0 |
| hypothetical protein | BK664_08155 | Not Available | Positive | 1837153 - 1837455 | 10651.5 |
| peptidase | BK664_08160 | Not Available | Positive | 1837455 - 1839035 | 58214.3 |
| hypothetical protein | BK664_08165 | Not Available | Positive | 1839036 - 1839362 | 11722.1 |
| rna polymerase subunit sigma-24 | BK664_08170 | Not Available | Positive | 1839364 - 1839930 | 21261.7 |
| sugar abc transporter substrate-binding protein | BK664_08175 | Not Available | Positive | 1839927 - 1840916 | 35975.4 |
| tonb-dependent receptor | BK664_08180 | Not Available | Positive | 1841191 - 1843620 | 88298.1 |
| arac family transcriptional regulator | BK664_08185 | Not Available | Negative | 1843764 - 1844639 | 32491.8 |
| eama family transporter | BK664_08190 | Not Available | Positive | 1844778 - 1845680 | 32440.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
