Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_08095 | Not Available | Negative | 1825444 - 1826247 | 30196.4 |
| amino acid dehydrogenase | BK664_08100 | Not Available | Positive | 1826431 - 1827450 | 35608.7 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | BK664_08105 | Not Available | Positive | 1827566 - 1828660 | 40126.7 |
| alpha-ketoacid dehydrogenase subunit beta | BK664_08110 | Not Available | Positive | 1828653 - 1829639 | 35553.3 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | BK664_08115 | Not Available | Positive | 1829656 - 1830765 | 39351.3 |
| hypothetical protein | BK664_08120 | Not Available | Negative | 1830832 - 1831182 | 12687.2 |
| phosphate-starvation-inducible protein psie | BK664_08125 | Not Available | Positive | 1831474 - 1831974 | 18558.0 |
| hypothetical protein | BK664_08130 | Not Available | Negative | 1831971 - 1832288 | 11580.0 |
| haaap family serine/threonine permease | BK664_08135 | Not Available | Negative | 1832505 - 1833806 | 46900.7 |
| l-serine ammonia-lyase | BK664_08140 | Not Available | Negative | 1833867 - 1835243 | 48739.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
