Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriocin immunity protein | BK664_08040 | Not Available | Negative | 1807874 - 1808134 | 9927.46 |
| bacteriocin immunity protein | BK664_08045 | Not Available | Negative | 1808302 - 1808562 | 9677.08 |
| adhesin | BK664_08055 | Not Available | Positive | 1811618 - 1813411 | 64047.8 |
| outer membrane lipoprotein-sorting protein | BK664_08060 | Not Available | Positive | 1813435 - 1814802 | 50829.3 |
| helix-turn-helix transcriptional regulator | BK664_08065 | Not Available | Positive | 1814943 - 1817498 | 95680.5 |
| hypothetical protein | BK664_08070 | Not Available | Positive | 1817664 - 1821110 | 129659.0 |
| iclr family transcriptional regulator | BK664_08075 | Not Available | Negative | 1821128 - 1821910 | 27780.4 |
| homogentisate 1,2-dioxygenase | BK664_08080 | Not Available | Positive | 1822075 - 1823379 | 47922.1 |
| fumarylacetoacetase | BK664_08085 | Not Available | Positive | 1823383 - 1824687 | 47316.3 |
| maleylacetoacetate isomerase | BK664_08090 | Not Available | Positive | 1824700 - 1825335 | 23373.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
