Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin | BK664_07990 | Not Available | Positive | 1800599 - 1801054 | 16019.1 |
| lysr family transcriptional regulator | BK664_07995 | Not Available | Negative | 1801035 - 1801931 | 32583.6 |
| murein hydrolase regulator lrga | BK664_08000 | Not Available | Positive | 1802028 - 1802414 | 13851.0 |
| hypothetical protein | BK664_08005 | Not Available | Positive | 1802404 - 1803090 | 24288.7 |
| class ii aldolase | BK664_08010 | Not Available | Positive | 1803238 - 1804020 | 28143.0 |
| alpha/beta hydrolase | BK664_08015 | Not Available | Positive | 1804020 - 1804922 | 34469.8 |
| serine/threonine protein kinase | BK664_08020 | Not Available | Positive | 1805035 - 1805946 | 32752.8 |
| n-acetylmuramoyl-l-alanine amidase | BK664_08025 | Not Available | Negative | 1806023 - 1806790 | 28512.4 |
| bacteriocin immunity protein | BK664_08030 | Not Available | Negative | 1807015 - 1807281 | 9910.36 |
| bacteriocin immunity protein | BK664_08035 | Not Available | Negative | 1807443 - 1807703 | 9833.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
