Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate aminotransferase | BK664_07940 | Not Available | Negative | 1793502 - 1794752 | 44320.5 |
| hopj type iii effector protein | BK664_07945 | Not Available | Negative | 1794990 - 1795328 | 11846.8 |
| cell division protein dedd | BK664_07950 | Not Available | Negative | 1795321 - 1795617 | 11284.2 |
| dihydroneopterin triphosphate 2'-epimerase | BK664_07955 | Not Available | Negative | 1795685 - 1796056 | 13884.8 |
| gtp cyclohydrolase i fole | BK664_07960 | Not Available | Negative | 1796059 - 1796634 | 21261.9 |
| dihydromonapterin reductase | BK664_07965 | Not Available | Negative | 1796657 - 1797367 | 25566.6 |
| antibiotic biosynthesis monooxygenase | BK664_07970 | Not Available | Negative | 1797565 - 1798134 | 21058.3 |
| helix-turn-helix-type transcriptional regulator | BK664_07975 | Not Available | Positive | 1798347 - 1799306 | 35888.0 |
| hypothetical protein | BK664_07980 | Not Available | Negative | 1799308 - 1799913 | 23282.8 |
| hypothetical protein | BK664_07985 | Not Available | Negative | 1799968 - 1800444 | 17652.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
