Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | BK664_07890 | Not Available | Positive | 1783450 - 1783935 | 17044.8 |
| glutathione peroxidase | BK664_07895 | Not Available | Positive | 1784061 - 1784543 | 17608.9 |
| 12-oxophytodienoate reductase | BK664_07900 | Not Available | Positive | 1784700 - 1785803 | 40307.1 |
| glycoside hydrolase | BK664_07905 | Not Available | Negative | 1785939 - 1787138 | 44580.7 |
| sulfate transporter cysz | BK664_07910 | Not Available | Negative | 1787179 - 1787931 | 28425.9 |
| thioredoxin-disulfide reductase | BK664_07915 | Not Available | Positive | 1788248 - 1789210 | 33904.2 |
| oxidoreductase | BK664_07920 | Not Available | Negative | 1789323 - 1790606 | 46564.8 |
| amino acid abc transporter substrate-binding protein | BK664_07925 | Not Available | Negative | 1790734 - 1791567 | 29962.6 |
| glutamine abc transporter atp-binding protein | BK664_07930 | Not Available | Negative | 1791608 - 1792390 | 28517.4 |
| amino acid abc transporter permease | BK664_07935 | Not Available | Negative | 1792397 - 1793371 | 35638.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
