Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease tldd | BK664_07740 | Not Available | Positive | 1755556 - 1756998 | 50158.6 |
| hypothetical protein | BK664_07745 | Not Available | Negative | 1757047 - 1757571 | 20122.1 |
| metalloprotease pmba | BK664_07750 | Not Available | Positive | 1757680 - 1759026 | 47880.6 |
| phosphocarrier protein hpr | BK664_07755 | Not Available | Negative | 1759401 - 1759676 | 9708.79 |
| rnase adaptor protein rapz | BK664_07760 | Not Available | Negative | 1759692 - 1760549 | 32075.4 |
| pts iia-like nitrogen-regulatory protein ptsn | BK664_07765 | Not Available | Negative | 1760552 - 1761016 | 16798.5 |
| ribosomal subunit interface protein | BK664_07770 | Not Available | Negative | 1761029 - 1761337 | 11606.0 |
| rna polymerase factor sigma-54 | BK664_07775 | Not Available | Negative | 1761412 - 1762905 | 56582.9 |
| lps export abc transporter atp-binding protein | BK664_07780 | Not Available | Negative | 1763090 - 1763815 | 26497.2 |
| lipopolysaccharide transport periplasmic protein lpta | BK664_07785 | Not Available | Negative | 1763815 - 1764363 | 19629.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
