Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_07640 | Not Available | Negative | 1731598 - 1731789 | 6491.0 |
| phospholipase | BK664_07645 | Not Available | Negative | 1731804 - 1733120 | 47150.8 |
| 5-dehydro-4-deoxyglucarate dehydratase | BK664_07650 | Not Available | Positive | 1733359 - 1734270 | 32711.3 |
| aldehyde dehydrogenase family protein | BK664_07655 | Not Available | Positive | 1734332 - 1735777 | 51190.0 |
| mfs transporter | BK664_07660 | Not Available | Positive | 1735936 - 1737303 | 49468.1 |
| galactarate dehydratase | BK664_07665 | Not Available | Positive | 1737315 - 1738868 | 56387.2 |
| malate transporter | BK664_07670 | Not Available | Positive | 1739157 - 1740098 | 33522.8 |
| 4-carboxymuconolactone decarboxylase | BK664_07675 | Not Available | Negative | 1740228 - 1740608 | 13861.5 |
| conjugal transfer protein trar | BK664_07680 | Not Available | Negative | 1740605 - 1741666 | 37566.5 |
| hypothetical protein | BK664_07685 | Not Available | Negative | 1741717 - 1742091 | 13475.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
