Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/betaine abc transporter substrate-binding protein | BK664_07540 | Not Available | Negative | 1706720 - 1707613 | 33007.5 |
| glycine/betaine abc transporter permease | BK664_07545 | Not Available | Negative | 1707634 - 1708350 | 24988.8 |
| peptide chain release factor 3 | BK664_07550 | Not Available | Positive | 1708714 - 1710297 | 59626.4 |
| arabinose abc transporter permease | BK664_07555 | Not Available | Positive | 1710530 - 1711765 | 44732.0 |
| hypothetical protein | BK664_07560 | Not Available | Positive | 1711925 - 1712170 | 8533.72 |
| dipeptide abc transporter atp-binding protein | BK664_07565 | Not Available | Negative | 1712345 - 1713325 | 36068.6 |
| dipeptide abc transporter atp-binding protein dppd | BK664_07570 | Not Available | Negative | 1713325 - 1714293 | 34973.9 |
| dipeptide abc transporter permease dppc | BK664_07575 | Not Available | Negative | 1714304 - 1715215 | 32490.8 |
| peptide abc transporter permease | BK664_07580 | Not Available | Negative | 1715229 - 1716239 | 36992.3 |
| abc transporter substrate-binding protein | BK664_07585 | Not Available | Negative | 1716314 - 1717909 | 59048.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
