Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | BK664_07490 | Not Available | Positive | 1691436 - 1692980 | 57564.9 |
| flavodoxin | BK664_07495 | Not Available | Negative | 1693124 - 1695652 | 93060.7 |
| ligand-gated channel protein | BK664_07500 | Not Available | Negative | 1695785 - 1698046 | 81555.7 |
| fe2+-dependent dioxygenase | BK664_07505 | Not Available | Positive | 1698260 - 1698940 | 25464.4 |
| hypothetical protein | BK664_07510 | Not Available | Positive | 1698937 - 1699692 | 27470.5 |
| hypothetical protein | BK664_07515 | Not Available | Positive | 1699945 - 1702215 | 84542.8 |
| hypothetical protein | BK664_07520 | Not Available | Positive | 1702318 - 1703220 | 34026.9 |
| ornithine decarboxylase | BK664_07525 | Not Available | Negative | 1703273 - 1704436 | 43477.0 |
| glycine/betaine abc transporter atp-binding protein | BK664_07530 | Not Available | Negative | 1704900 - 1706057 | 43100.0 |
| choline abc transporter permease | BK664_07535 | Not Available | Negative | 1706054 - 1706707 | 22898.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
